BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013A08SP1|AL426454
(797 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1786 1577 0.0
>3x_Contig1786
Length = 33838
Score = 1577 bits (795), Expect = 0.0
Identities = 796/797 (99%)
Strand = Plus / Plus
Query: 1 tcttctccactacatctctaaaatactggaaagacgattggtgaaaacttgttgaagagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25455 tcttctccactacatctctaaaatactggaaagacgattggtgaaaacttgttgaagagt 25514
Query: 61 gagatctttaagcagaaggaaagacgggaaccgaagtcgaacatagtgaatattttcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25515 gagatctttaagcagaaggaaagacgggaaccgaagtcgaacatagtgaatattttcttg 25574
Query: 121 ctcagttctgatacttcaacttgagtttttagttgattgctaaattggtacttaattctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25575 ctcagttctgatacttcaacttgagtttttagttgattgctaaattggtacttaattctt 25634
Query: 181 agtacgaagaccacaattatataggaaacgaagtcaaggaaagtttccgaaagacaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25635 agtacgaagaccacaattatataggaaacgaagtcaaggaaagtttccgaaagacaaaaa 25694
Query: 241 aaaacttgggttccctttaatactagagatagaaaggttgtaacacatctcacggcgtaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25695 aaaacttgggttccctttaatactagagatagaaaggttgtaacacatctcacggcgtaa 25754
Query: 301 gaatttagattgaatatcaaagctgaattgtttggaacgtttgcmaactattaaagagac 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 25755 gaatttagattgaatatcaaagctgaattgtttggaacgtttgcaaactattaaagagac 25814
Query: 361 tcgcacatttacaggatatatacaggcttatcaaagagatggcattgggtcgttattctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25815 tcgcacatttacaggatatatacaggcttatcaaagagatggcattgggtcgttattctg 25874
Query: 421 ctctgttgtttatggtaccgcgaatattcgcgctacctatttttaaaagatccgttttat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25875 ctctgttgtttatggtaccgcgaatattcgcgctacctatttttaaaagatccgttttat 25934
Query: 481 cagtgctccaaaaggaggcacctccagctgaagatgaagcaacatttaccacctttcttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25935 cagtgctccaaaaggaggcacctccagctgaagatgaagcaacatttaccacctttcttg 25994
Query: 541 ttatctccatgatattggttcttctgggtggtatctttgctggtttaactcttggtctta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25995 ttatctccatgatattggttcttctgggtggtatctttgctggtttaactcttggtctta 26054
Query: 601 tgggtcaagatgaggtttatttgaaagtcatgcaaacaagtggtactgcatcggaaaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26055 tgggtcaagatgaggtttatttgaaagtcatgcaaacaagtggtactgcatcggaaaaat 26114
Query: 661 atcatgccaatagggttctcagcttgttgaacaggggtaaacattgggtgttagtgacat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26115 atcatgccaatagggttctcagcttgttgaacaggggtaaacattgggtgttagtgacat 26174
Query: 721 tactcttgtccaacgtcatcaccaatgaaactttacctattgtcttggatagatgtcttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26175 tactcttgtccaacgtcatcaccaatgaaactttacctattgtcttggatagatgtcttg 26234
Query: 781 gcggcggatggcaagcc 797
|||||||||||||||||
Sbjct: 26235 gcggcggatggcaagcc 26251
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6348
Number of Sequences: 1807
Number of extensions: 6348
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 797
length of database: 10,358,551
effective HSP length: 16
effective length of query: 781
effective length of database: 10,329,639
effective search space: 8067448059
effective search space used: 8067448059
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)